Transcript: lnc-SNRPB2-2:2

Basic information

LNCipedia transcript ID: lnc-SNRPB2-2:2 
LNCipedia gene ID: lnc-SNRPB2-2
Ensembl Gene ID: ENSG00000273998
Ensembl Transcript ID: ENST00000616572
Location (hg19): chr20:16556713-16560260
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 774 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616572.1
Alternative gene names: ENSG00000273998.1; RP4-777L9.2; AL049794.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -215.3364 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNRPB2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SNRPB2-2:2
4.1 lnc-SNRPB2-2:2
5.0 lnc-SNRPB2-2:2
5.1 lnc-CFAP61-45:7
5.2 lnc-SNRPB2-2:2