Transcript: lnc-SNRPN-14:5

Basic information

LNCipedia transcript ID: lnc-SNRPN-14:5 
LNCipedia gene ID: lnc-SNRPN-14
Location (hg19): chr15:25684374-25686139
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1766 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022361.1|FTMT26000000585.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.0949 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNRPN-14:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNURF-14:2
5.0 lnc-SNURF-14:2
5.1 lnc-SNRPN-14:2
5.2 lnc-SNRPN-14:5