Transcript: lnc-SNTG1-11:2

Basic information

LNCipedia transcript ID: lnc-SNTG1-11:2 
LNCipedia gene ID: lnc-SNTG1-11
Location (hg19): chr8:52307791-52310090
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1622 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000098831.1|ENCT00000424868.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.7372 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNTG1-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC090186.1-11:2
5.0 lnc-AC090186.1-11:2
5.1 lnc-SDCBP-93:2
5.2 lnc-SNTG1-11:2