Transcript: lnc-SNX20-5:4

Basic information

LNCipedia transcript ID: lnc-SNX20-5:4 
LNCipedia gene ID: lnc-SNX20-5
Location (hg19): chr16:50829745-50836378
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 648 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT142442
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.8496 non-coding 
CPAT coding probability 4.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX20-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNX20-5:4
4.0 lnc-SNX20-5:4
4.1 lnc-SNX20-5:4
5.0 lnc-SNX20-5:4
5.1 lnc-CFAP20-134:2
5.2 lnc-SNX20-5:4