Transcript: lnc-SOCS2-1:3

Basic information

LNCipedia transcript ID: lnc-SOCS2-1:3 
LNCipedia gene ID: lnc-SOCS2-1
Location (hg19): chr12:93903263-93903544
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 282 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT029951
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.72 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOCS2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL42-1:1
4.0 lnc-MRPL42-1:1
4.1 lnc-MRPL42-1:1
5.0 lnc-MRPL42-1:1
5.1 lnc-PLEKHG7-18:2
5.2 lnc-SOCS2-1:3