Transcript: lnc-SORCS1-9:1

Basic information

LNCipedia transcript ID: lnc-SORCS1-9:1 
LNCipedia gene ID: lnc-SORCS1-9
Location (hg19): chr10:107558522-107570085
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 657 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_369_chr10:107558521-107570085_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.2313 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS1-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SORCS1-9:1
4.0 lnc-SORCS1-9:1
4.1 lnc-SORCS1-9:1
5.0 lnc-SORCS1-9:1
5.1 lnc-BBIP1-53:1
5.2 lnc-SORCS1-9:1