Transcript: lnc-SOX7-7:1

Basic information

LNCipedia transcript ID: lnc-SOX7-7:1 
LNCipedia gene ID: lnc-SOX7-7
Location (hg19): chr8:10660588-10662320
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1733 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT125018
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.488 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOX7-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1L1-7:1
4.0 lnc-RP1L1-7:1
4.1 lnc-RP1L1-7:1
5.0 lnc-RP1L1-7:1
5.1 lnc-DEFA1B-58:1
5.2 lnc-SOX7-7:1