Transcript: lnc-SOX9-8:6

Basic information

LNCipedia transcript ID: lnc-SOX9-8:6 
LNCipedia gene ID: lnc-SOX9-8
Location (hg19): chr17:70609752-70632785
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8806 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032333.1|MICT00000153665.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.3789 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOX9-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SOX9-8:6
5.0 lnc-SOX9-8:6
5.1 lnc-TMEM94-59:5
5.2 lnc-SOX9-8:6