Transcript: lnc-SP110-6:3

Basic information

LNCipedia transcript ID: lnc-SP110-6:3 
LNCipedia gene ID: lnc-SP110-6
Location (hg19): chr2:231275957-231276609
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 653 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051826.1|FTMT20600014876.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.4462 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SP110-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SP110-6:3
5.0 lnc-SP110-6:3
5.1 lnc-HTR2B-9:3
5.2 lnc-SP110-6:3