Transcript: lnc-SP110-9:1

Basic information

LNCipedia transcript ID: lnc-SP110-9:1 
LNCipedia gene ID: lnc-SP110-9
Location (hg19): chr2:231200636-231202711
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2076 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA830:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.3757 non-coding 
CPAT coding probability 98.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SP110-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SP110-9:1
4.1 lnc-SP110-9:1
5.0 lnc-SP110-9:1
5.1 lnc-HTR2B-11:1
5.2 lnc-SP110-9:1