Transcript: lnc-SPAM1-2:7

Basic information

LNCipedia transcript ID: lnc-SPAM1-2:7 
LNCipedia gene ID: lnc-SPAM1-2
Location (hg19): chr7:123634676-123667713
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1754 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241345.1|ENST00000472838.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.1189 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAM1-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPAM1-2:7
5.0 lnc-SPAM1-2:7
5.1 lnc-SPAM1-2:7
5.2 lnc-SPAM1-2:7