Transcript: lnc-SPATA13-4:2

Basic information

LNCipedia transcript ID: lnc-SPATA13-4:2 
LNCipedia gene ID: lnc-SPATA13-4
Location (hg19): chr13:24528591-24529793
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1203 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014027.1|HBMT00000379504.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.4336 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA13-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPATA13-4:2
5.0 lnc-SPATA13-4:2
5.1 lnc-GTF3A-76:2
5.2 lnc-SPATA13-4:2