Transcript: lnc-SPATA31A5-1:4

Basic information

LNCipedia transcript ID: lnc-SPATA31A5-1:4 
LNCipedia gene ID: lnc-SPATA31A5-1
Location (hg19): chr9:41516054-41521999
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 623 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_026803
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.9099 non-coding 
CPAT coding probability 19.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31A5-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A5-1:4
4.0 FAM74A6:4
4.1 FAM74A6:4
5.0 FAM74A6:4
5.1 lnc-ZNF658-76:4
5.2 lnc-SPATA31A5-1:4