Transcript: lnc-SPATA31A6-7:2

Basic information

LNCipedia transcript ID: lnc-SPATA31A6-7:2 
LNCipedia gene ID: lnc-SPATA31A6-7
Location (hg19): chr9:44302233-44303807
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 488 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT131380
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 92.3068 coding 
CPAT coding probability 25.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA31A6-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNTNAP3B-7:2
4.0 lnc-CNTNAP3B-7:2
4.1 lnc-CNTNAP3B-7:2
5.0 lnc-CNTNAP3B-7:2
5.1 lnc-DCAF10-58:2
5.2 lnc-SPATA31A6-7:2