Transcript: lnc-SPATA31A7-7:3

Basic information

LNCipedia transcript ID: lnc-SPATA31A7-7:3 
LNCipedia gene ID: lnc-SPATA31A7-7
Location (hg19): chr9:45048577-45052463
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 747 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT131410
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.7986 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31A7-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27C-7:3
4.0 lnc-FAM27C-7:3
4.1 lnc-FAM27C-7:3
5.0 lnc-FAM27C-7:3
5.1 lnc-ZNF658-68:3
5.2 lnc-SPATA31A7-7:3