Transcript: lnc-SPATA6-8:1

Basic information

LNCipedia transcript ID: lnc-SPATA6-8:1 
LNCipedia gene ID: lnc-SPATA6-8
Location (hg19): chr1:48240910-48459884
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 619 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT003102
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 720.6098 coding 
CPAT coding probability 98.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA6-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-543D5.3.1-1:2
4.0 lnc-RP11-543D5.3.1-1:2
4.1 lnc-RP11-543D5.3.1-1:2
5.0 lnc-RP11-543D5.3.1-1:2
5.1 lnc-STIL-1:6
5.2 lnc-SPATA6-8:1