Transcript: lnc-SPCS2-3:3

Basic information

LNCipedia transcript ID: lnc-SPCS2-3:3 
LNCipedia gene ID: lnc-SPCS2-3
Location (hg19): chr11:74622316-74631272
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 850 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT022965
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.2 non-coding 
CPAT coding probability 70.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPCS2-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPCS2-3:3
4.0 lnc-SPCS2-3:3
4.1 lnc-SPCS2-3:3
5.0 lnc-SPCS2-3:3
5.1 lnc-TCIRG1-153:3
5.2 lnc-SPCS2-3:3