Transcript: lnc-SPG21-45:1

Basic information

LNCipedia transcript ID: lnc-SPG21-45:1 
LNCipedia gene ID: lnc-SPG21-45
Ensembl Gene ID: ENSG00000274383
Ensembl Transcript ID: ENST00000619654
Location (hg19): :-
Strand:
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 520 bp
Exons: 0
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619654.1
Alternative gene names: ENSG00000274383.1; CTD-2017F17.2; AC103691.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.5087 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPG21-45:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TIPIN-45:1
5.1 lnc-TIPIN-45:1
5.2 lnc-SPG21-45:1