Transcript: lnc-SPG7-4:3

Basic information

LNCipedia transcript ID: lnc-SPG7-4:3 
LNCipedia gene ID: lnc-SPG7-4
Location (hg19): chr16:89497373-89520902
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1770 bp
Exons: 3
Sources: Biogazelle lncRNA chip; NONCODE v4
Alternative transcript names: ENST00000506843; NONHSAT144526
Alternative gene names: ENSG00000249088


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.5896 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPG7-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SPG7-1:1
3.1 lnc-SPG7-1:1
4.0 lnc-SPG7-4:3
4.1 lnc-SPG7-4:3
5.0 lnc-SPG7-4:3
5.1 lnc-SPG7-5:3
5.2 lnc-SPG7-4:3