Transcript: lnc-SPINK2-1:3

Basic information

LNCipedia transcript ID: lnc-SPINK2-1:3 
LNCipedia gene ID: lnc-SPINK2-1
Location (hg19): chr4:57676026-57687639
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 593 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT096520; NR_073417
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 345.2744 coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPINK2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPINK2-1:3
4.0 lnc-SPINK2-1:3
4.1 lnc-SPINK2-1:3
5.0 lnc-SPINK2-1:3
5.1 lnc-FRYL-58:2
5.2 lnc-SPINK2-1:3