Transcript: lnc-SPINK8-1:3

Basic information

LNCipedia transcript ID: lnc-SPINK8-1:3 
LNCipedia gene ID: lnc-SPINK8-1
Location (hg19): chr3:48336695-48342878
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1268 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT089553
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 488.4235 coding 
CPAT coding probability 47.50% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPINK8-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPINK8-1:3
4.0 lnc-SPINK8-1:3
4.1 lnc-SPINK8-1:3
5.0 lnc-SPINK8-1:3
5.1 lnc-TMEM89-18:3
5.2 lnc-SPINK8-1:3