Transcript: lnc-SPRED2-13:1

Basic information

LNCipedia transcript ID: lnc-SPRED2-13:1 
LNCipedia gene ID: lnc-SPRED2-13
Location (hg19): chr2:65806100-65835542
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 930 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_1852_chr2:65806099-65811535_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1043 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPRED2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPRED2-13:1
4.0 lnc-SPRED2-13:1
4.1 lnc-SPRED2-13:1
5.0 lnc-SPRED2-13:1
5.1 lnc-GKN2-67:1
5.2 lnc-SPRED2-13:1