Transcript: lnc-SPRY1-12:1

Basic information

LNCipedia transcript ID: lnc-SPRY1-12:1 
LNCipedia gene ID: lnc-SPRY1-12
Location (hg19): chr4:124946445-124949446
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 663 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT098207; FPKM1_group_24043_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.5139 non-coding 
CPAT coding probability 1.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPRY1-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPRY1-3:2
4.0 lnc-SPRY1-3:2
4.1 lnc-SPRY1-3:2
5.0 lnc-SPRY1-3:2
5.1 lnc-FGF2-12:1
5.2 lnc-SPRY1-12:1