Transcript: lnc-SRPK2-1:24

Basic information

LNCipedia transcript ID: lnc-SRPK2-1:24 
LNCipedia gene ID: lnc-SRPK2-1
Location (hg19): chr7:104622175-104624351
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1162 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228393.3|HBMT00001345537.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.5166 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRPK2-1:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SRPK2-1:24
5.0 lnc-SRPK2-1:24
5.1 lnc-POLR2J2-25:22
5.2 lnc-SRPK2-1:24