Transcript: lnc-SRPK2-1:6

Basic information

LNCipedia transcript ID: lnc-SRPK2-1:6 
LNCipedia gene ID: lnc-SRPK2-1
RefSeq ID: NR_024586
Location (hg19): chr7:104650989-104654588
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3600 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT122596; NR_024586; NR_024586.1
Alternative gene names: KMT2E-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.3047 non-coding 
CPAT coding probability 10.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRPK2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-1:6
4.0 lnc-SRPK2-1:6
4.1 lnc-SRPK2-1:6
5.0 lnc-SRPK2-1:6
5.1 lnc-POLR2J2-25:4
5.2 lnc-SRPK2-1:6