Transcript: lnc-SRPK2-1:7

Basic information

LNCipedia transcript ID: lnc-SRPK2-1:7 
LNCipedia gene ID: lnc-SRPK2-1
Location (hg19): chr7:104650989-104653494
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2506 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT122595
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.202 non-coding 
CPAT coding probability 11.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRPK2-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-1:7
4.0 lnc-SRPK2-1:7
4.1 lnc-SRPK2-1:7
5.0 lnc-SRPK2-1:7
5.1 lnc-POLR2J2-25:12
5.2 lnc-SRPK2-1:7