Transcript: lnc-SRRD-1:5

Basic information

LNCipedia transcript ID: lnc-SRRD-1:5 
LNCipedia gene ID: lnc-SRRD-1
Location (hg19): chr22:26908525-26910535
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2011 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA911:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.0645 non-coding 
CPAT coding probability 6.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRRD-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SRRD-1:5
4.1 lnc-SRRD-1:5
5.0 lnc-SRRD-1:5
5.1 lnc-CABIN1-51:8
5.2 lnc-SRRD-1:5