Transcript: lnc-SRSF6-1:5

Basic information

LNCipedia transcript ID: lnc-SRSF6-1:5 
LNCipedia gene ID: lnc-SRSF6-1
Location (hg19): chr20:41818705-41831635
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3868 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233508.1|MICT00000218089.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.4711 non-coding 
CPAT coding probability 7.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRSF6-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SRSF6-1:5
5.0 lnc-SRSF6-1:5
5.1 lnc-STK4-62:2
5.2 lnc-SRSF6-1:5