Transcript: lnc-SSBP2-5:7

Basic information

LNCipedia transcript ID: lnc-SSBP2-5:7 
LNCipedia gene ID: lnc-SSBP2-5
Location (hg19): chr5:80911305-80912404
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 573 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT102468
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 73.8236 coding 
CPAT coding probability 14.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SSBP2-5:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACOT12-5:7
4.0 lnc-SSBP2-5:7
4.1 lnc-SSBP2-5:7
5.0 lnc-SSBP2-5:7
5.1 lnc-ANKRD34B-30:7
5.2 lnc-SSBP2-5:7