Transcript: lnc-SSPO-1:1

Basic information

LNCipedia transcript ID: lnc-SSPO-1:1 
LNCipedia gene ID: lnc-SSPO-1
Location (hg19): chr7:149470297-149473130
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2834 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT124042
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.7919 non-coding 
CPAT coding probability 18.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSPO-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRBA1-2:1
4.0 lnc-KRBA1-2:1
4.1 lnc-ZNF862-1:34
5.0 lnc-ZNF862-1:34
5.1 lnc-ATP6V0E2-9:1
5.2 lnc-SSPO-1:1