Transcript: lnc-SSR2-2:4

Basic information

LNCipedia transcript ID: lnc-SSR2-2:4 
LNCipedia gene ID: lnc-SSR2-2
Location (hg19): chr1:155938011-155940854
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2176 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT006785
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 332.147 coding 
CPAT coding probability 15.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SSR2-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGEF2-1:7
4.0 lnc-ARHGEF2-1:7
4.1 lnc-ARHGEF2-1:7
5.0 lnc-ARHGEF2-1:7
5.1 lnc-KHDC4-3:4
5.2 lnc-SSR2-2:4