Transcript: lnc-SSTR1-3:1

Basic information

LNCipedia transcript ID: lnc-SSTR1-3:1 
LNCipedia gene ID: lnc-SSTR1-3
Location (hg19): chr14:38385713-38397296
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 400 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022479; NONHSAT036477
Alternative gene names: XLOC_010808; linc-SSTR1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -292.9201 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSTR1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SSTR1-3:1
3.1 lnc-SSTR1-3:1
4.0 lnc-SSTR1-3:1
4.1 lnc-SSTR1-3:1
5.0 lnc-SSTR1-3:1
5.1 lnc-BRMS1L-53:2
5.2 lnc-SSTR1-3:1