Transcript: lnc-SSTR4-2:8

Basic information

LNCipedia transcript ID: lnc-SSTR4-2:8 
LNCipedia gene ID: lnc-SSTR4-2
Ensembl Gene ID: ENSG00000275179
Ensembl Transcript ID: ENST00000622708
Location (hg19): chr20:23160813-23168181
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 673 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622708.1
Alternative gene names: ENSG00000275179.1; RP4-737E23.7; AL118508.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -222.1658 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSTR4-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SSTR4-2:8
4.1 lnc-SSTR4-2:8
5.0 lnc-SSTR4-2:8
5.1 lnc-CST8-9:3
5.2 lnc-SSTR4-2:8