Transcript: lnc-ST3GAL1-8:6

Basic information

LNCipedia transcript ID: lnc-ST3GAL1-8:6 
LNCipedia gene ID: lnc-ST3GAL1-8
RefSeq ID: NR_134462
Location (hg19): chr8:134676004-134696309
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 545 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134462.1
Alternative gene names: LOC105375773


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.6941 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL1-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM84B-76:6
5.1 lnc-FAM84B-76:6
5.2 lnc-ST3GAL1-8:6