Transcript: lnc-ST3GAL4-10:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-10:1 
LNCipedia gene ID: lnc-ST3GAL4-10
Location (hg19): chr11:127140891-127146541
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 319 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019530; NONHSAT025054
Alternative gene names: XLOC_009325; linc-FLI1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -763.208 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-168K9.2.1-3:1
3.1 lnc-RP11-168K9.2.1-3:1
4.0 lnc-RP11-168K9.2.1-3:1
4.1 lnc-RP11-168K9.2.1-3:1
5.0 lnc-RP11-168K9.2.1-3:1
5.1 lnc-JAM3-52:1
5.2 lnc-ST3GAL4-10:1