Transcript: lnc-ST3GAL4-4:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-4:1 
LNCipedia gene ID: lnc-ST3GAL4-4
RefSeq ID: NR_120532
Location (hg19): chr11:126522673-126551998
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 473 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120532; NR_120532.1
Alternative gene names: LOC101929427


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -180.9615 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-115C10.1.1-2:4
4.0 lnc-RP11-115C10.1.1-2:4
4.1 lnc-RP11-115C10.1.1-2:4
5.0 lnc-RP11-115C10.1.1-2:4
5.1 lnc-JAM3-60:1
5.2 lnc-ST3GAL4-4:1