Transcript: lnc-ST3GAL4-6:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-6:1 
LNCipedia gene ID: lnc-ST3GAL4-6
Location (hg19): chr11:126646172-126712131
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001qeh_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -738.5074 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-115C10.1.1-4:1
4.0 lnc-RP11-115C10.1.1-4:1
4.1 lnc-RP11-115C10.1.1-4:1
5.0 lnc-RP11-115C10.1.1-4:1
5.1 lnc-JAM3-58:1
5.2 lnc-ST3GAL4-6:1