Transcript: lnc-ST3GAL4-8:2

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-8:2 
LNCipedia gene ID: lnc-ST3GAL4-8
Location (hg19): chr11:126890517-126891343
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 593 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00020017
Alternative gene names: XLOC_009322; linc-FLI1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -253.6396 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-688I9.2.1-1:2
3.1 lnc-RP11-688I9.2.1-3:2
4.0 lnc-RP11-688I9.2.1-3:2
4.1 lnc-RP11-688I9.2.1-3:2
5.0 lnc-RP11-688I9.2.1-3:2
5.1 lnc-JAM3-56:2
5.2 lnc-ST3GAL4-8:2