Transcript: lnc-ST3GAL6-5:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL6-5:1 
LNCipedia gene ID: lnc-ST3GAL6-5
Location (hg19): chr3:98376584-98377010
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 427 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT090808
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.2145 non-coding 
CPAT coding probability 13.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL6-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ST3GAL6-5:1
4.0 lnc-ST3GAL6-5:1
4.1 lnc-ST3GAL6-5:1
5.0 lnc-ST3GAL6-5:1
5.1 lnc-OR5K4-11:1
5.2 lnc-ST3GAL6-5:1