Transcript: lnc-ST6GALNAC6-1:3

Basic information

LNCipedia transcript ID: lnc-ST6GALNAC6-1:3 
LNCipedia gene ID: lnc-ST6GALNAC6-1
Location (hg19): chr9:130665294-130667603
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2310 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT134864
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.2028 non-coding 
CPAT coding probability 44.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ST6GALNAC6-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AK1-1:5
4.0 lnc-ST6GALNAC6-1:3
4.1 lnc-ST6GALNAC6-1:3
5.0 lnc-ST6GALNAC6-1:3
5.1 lnc-SPOUT1-43:2
5.2 lnc-ST6GALNAC6-1:3