Transcript: lnc-STARD13-2:1

Basic information

LNCipedia transcript ID: lnc-STARD13-2:1 
LNCipedia gene ID: lnc-STARD13-2
Location (hg19): chr13:33929343-34250905
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 844 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000454681; ENST00000454681.1; LINC00464-001; OTTHUMT00000044447.1; NONHSAT033147
Alternative gene names: ENSG00000230490; RP11-141M1.3; ENSG00000230490.1; LINC00464; OTTHUMG00000016714.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.7887 non-coding 
CPAT coding probability 1.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STARD13-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STARD13-2:1
3.1 lnc-STARD13-2:1
4.0 lnc-STARD13-2:1
4.1 lnc-STARD13-2:1
5.0 lnc-STARD13-2:1
5.1 lnc-CCDC169-37:8
5.2 lnc-STARD13-2:1