Transcript: lnc-STARD9-3:1

Basic information

LNCipedia transcript ID: lnc-STARD9-3:1 
LNCipedia gene ID: lnc-STARD9-3
Ensembl Gene ID: ENSG00000274403
Ensembl Transcript ID: ENST00000617465
Location (hg19): chr15:43018781-43019409
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 629 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617465.1
Alternative gene names: ENSG00000274403.1; CTD-2036P10.6; AC090510.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -129.9087 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STARD9-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-STARD9-3:1
4.1 lnc-STARD9-3:1
5.0 lnc-STARD9-3:1
5.1 lnc-TMEM62-5:1
5.2 lnc-STARD9-3:1