Transcript: lnc-STAT6-1:2

Basic information

LNCipedia transcript ID: lnc-STAT6-1:2 
LNCipedia gene ID: lnc-STAT6-1
Location (hg19): chr12:57477787-57481646
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 758 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021326; NONHSAT028871
Alternative gene names: XLOC_010097; linc-TMEM194A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.8034 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STAT6-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STAT6-1:2
3.1 lnc-STAT6-1:2
4.0 lnc-STAT6-1:2
4.1 lnc-STAT6-1:2
5.0 lnc-STAT6-1:2
5.1 lnc-PMEL-54:2
5.2 lnc-STAT6-1:2