Transcript: lnc-STK35-2:7

Basic information

LNCipedia transcript ID: lnc-STK35-2:7 
LNCipedia gene ID: lnc-STK35-2
Location (hg19): chr20:2135141-2186703
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1853 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2059_chr20:2135140-2141798_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.1141 non-coding 
CPAT coding probability 21.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK35-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGM3-2:1
4.0 lnc-STK35-2:7
4.1 lnc-STK35-2:7
5.0 lnc-STK35-2:7
5.1 lnc-MAVS-34:1
5.2 lnc-STK35-2:7