Transcript: lnc-STK39-2:8

Basic information

LNCipedia transcript ID: lnc-STK39-2:8 
LNCipedia gene ID: lnc-STK39-2
Location (hg19): chr2:168742688-168797690
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5956 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235335.2|MICT00000202466.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.6341 non-coding 
CPAT coding probability 13.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK39-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-STK39-2:8
5.0 lnc-STK39-2:8
5.1 lnc-LRP2-19:5
5.2 lnc-STK39-2:8