Transcript: lnc-STK39-2:9

Basic information

LNCipedia transcript ID: lnc-STK39-2:9 
LNCipedia gene ID: lnc-STK39-2
RefSeq ID: NR_131227
Location (hg19): chr2:168671284-168797654
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 922 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131227.1
Alternative gene names: LOC105616981


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 118.2506 coding 
CPAT coding probability 6.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-STK39-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LRP2-19:7
5.1 lnc-LRP2-19:7
5.2 lnc-STK39-2:9