Transcript: lnc-STMP1-3:1

Basic information

LNCipedia transcript ID: lnc-STMP1-3:1 
LNCipedia gene ID: lnc-STMP1-3
Ensembl Gene ID: ENSG00000273219
Ensembl Transcript ID: ENST00000609370
Location (hg19): chr7:135389285-135389589
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 305 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609370.1
Alternative gene names: ENSG00000273219.1; RP11-644N4.1; AC091736.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.7944 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf73-3:1
4.0 lnc-C7orf73-3:1
4.1 lnc-C7orf73-3:1
5.0 lnc-C7orf73-3:1
5.1 lnc-TMEM140-11:1
5.2 lnc-STMP1-3:1