Transcript: lnc-STN1-2:6

Basic information

LNCipedia transcript ID: lnc-STN1-2:6 
LNCipedia gene ID: lnc-STN1-2
Location (hg19): chr10:105697904-105726769
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1573 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018594; NONHSAT016216
Alternative gene names: XLOC_008935; linc-OBFC1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.8034 non-coding 
CPAT coding probability 4.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STN1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OBFC1-1:1
3.1 lnc-OBFC1-2:1
4.0 lnc-OBFC1-2:1
4.1 lnc-OBFC1-2:1
5.0 lnc-OBFC1-2:1
5.1 lnc-CPN1-103:6
5.2 lnc-STN1-2:6