Transcript: lnc-STOX2-1:2

Basic information

LNCipedia transcript ID: lnc-STOX2-1:2 
LNCipedia gene ID: lnc-STOX2-1
Location (hg19): chr4:184687063-184688453
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1278 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008357; NONHSAT099501
Alternative gene names: XLOC_003804; linc-STOX2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.8761 non-coding 
CPAT coding probability 14.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STOX2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRAPPC11-1:1
3.1 lnc-TRAPPC11-1:1
4.0 lnc-TRAPPC11-1:1
4.1 lnc-TRAPPC11-1:1
5.0 lnc-TRAPPC11-1:1
5.1 lnc-FAM149A-43:1
5.2 lnc-STOX2-1:2