Transcript: lnc-STPG1-3:2

Basic information

LNCipedia transcript ID: lnc-STPG1-3:2 
LNCipedia gene ID: lnc-STPG1-3
RefSeq ID: NR_109781
Location (hg19): chr1:24865764-24882515
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 973 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109781; NR_109781.1
Alternative gene names: LOC100506985


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.6526 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STPG1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf201-3:5
4.0 lnc-C1orf201-3:5
4.1 lnc-C1orf201-3:5
5.0 lnc-C1orf201-3:5
5.1 lnc-ID3-24:2
5.2 lnc-STPG1-3:2